Resources and tools for the study of Bordetella

Posts tagged KEGG

New tutorial available

We just built a new tutorial explaining how to visualize gene expression data using KEGG metabolic models. The tutorial can be found here.

KEGG

KEGG

How to use KEGG Mapper to visualize your data on KEGG Pathways? ow to use KEGG Mapper to visualize your data on KEGG Pathways? The KEGG database allows users to “paint” their own data on the pathways referenced in the database. This tool will allow you to visualize gene expression data including RNA-seq. As a first […]

Databases and tools

Databases and tools

Databases: GOLD: Genome Online Database Biocyc Pathways Kyoto Encyclopedia of Genes and Genomes (KEGG) Pathways Ortholog list The genomes of various strains and species have been aligned using Mauve. The list of orthologs can be downloaded below. Bordetella pertussis: Mauve alignment; List of orthologs Bordetella bronchiseptica: Mauve alignment; List of orthologs Bordetella parapertussis: Mauve alignment; List of orthologs